| Protein ZmALF12 | |
|---|---|
|
ZmALF12 is a protein in the Alfin-like family.
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| Information | |
| TF Name: | ZmALF12 |
| Species: | Maize |
| TF Family: | Alfin-like |
| Gene Name(Synonym): | ALF12 |
| Uniprot ID: | B6SQT6 |
Protein ZmALF12
ZmALF12 is a protein in the Alfin-like family.
| Overview of domains present in v5 transcripts | |||
|---|---|---|---|
| Alfin-like | PF00628 | PF12165 | |
| Zm00001eb336130_T001 |  | | |
Protein-DNA Interactions
Interactions where ZmALF12 is the regulator
Interactions where ZmALF12 is the target
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Zm00001eb336130_T001 from maize genome v5
Amino Acid Sequence
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MADAASGRGHVVYPPRSAEDIFKDYRARRSAILRALTHEVEDFYAQCDPDKENLCLYGYANEAWEVALPAEEVPTELPEP
ALGINFARDGMNRRDWLALVAVHSDSWLLSVAFYYAARLNRNDRKRLFGMINELQTVFEVVSGARQQQSKERSSMDNGGR
AKPVKIENNGKVTDEAYEDDSDHGETLCGTCGGIYNADEFWIGCDMCERWYHGKCVKITPAKAESIKHYKCPSCSSKRAR
Q
MADAASGRGHVVYPPRSAEDIFKDYRARRSAILRALTHEVEDFYAQCDPDKENLCLYGYANEAWEVALPAEEVPTELPEP
ALGINFARDGMNRRDWLALVAVHSDSWLLSVAFYYAARLNRNDRKRLFGMINELQTVFEVVSGARQQQSKERSSMDNGGR
AKPVKIENNGKVTDEAYEDDSDHGETLCGTCGGIYNADEFWIGCDMCERWYHGKCVKITPAKAESIKHYKCPSCSSKRAR
Q
MADAASGRGHVVYPPRSAEDIFKDYRARRSAILRALTHEVEDFYAQCDPDKENLCLYGYANEAWEVALPAEEVPTELPEP
ALGINFARDGMNRRDWLALVAVHSDSWLLSVAFYYAARLNRNDRKRLFGMINELQTVFEVVSGARQQQSKERSSMDNGGR
AKPVKIENNGKVTDEAYEDDSDHGETLCGTCGGIYNADEFWIGCDMCERWYHGKCVKITPAKAESIKHYKCPSCSSKRAR
Q
MADAASGRGHVVYPPRSAEDIFKDYRARRSAILRALTHEVEDFYAQCDPDKENLCLYGYANEAWEVALPAEEVPTELPEP
ALGINFARDGMNRRDWLALVAVHSDSWLLSVAFYYAARLNRNDRKRLFGMINELQTVFEVVSGARQQQSKERSSMDNGGR
AKPVKIENNGKVTDEAYEDDSDHGETLCGTCGGIYNADEFWIGCDMCERWYHGKCVKITPAKAESIKHYKCPSCSSKRAR
Q
MADAASGRGHVVYPPRSAEDIFKDYRARRSAILRALTHEVEDFYAQCDPDKENLCLYGYANEAWEVALPAEEVPTELPEP
ALGINFARDGMNRRDWLALVAVHSDSWLLSVAFYYAARLNRNDRKRLFGMINELQTVFEVVSGARQQQSKERSSMDNGGR
AKPVKIENNGKVTDEAYEDDSDHGETLCGTCGGIYNADEFWIGCDMCERWYHGKCVKITPAKAESIKHYKCPSCSSKRAR
Q
MADAASGRGHVVYPPRSAEDIFKDYRARRSAILRALTHEVEDFYAQCDPDKENLCLYGYANEAWEVALPAEEVPTELPEP
ALGINFARDGMNRRDWLALVAVHSDSWLLSVAFYYAARLNRNDRKRLFGMINELQTVFEVVSGARQQQSKERSSMDNGGR
AKPVKIENNGKVTDEAYEDDSDHGETLCGTCGGIYNADEFWIGCDMCERWYHGKCVKITPAKAESIKHYKCPSCSSKRAR
Q
MADAASGRGHVVYPPRSAEDIFKDYRARRSAILRALTHEVEDFYAQCDPDKENLCLYGYANEAWEVALPAEEVPTELPEP
ALGINFARDGMNRRDWLALVAVHSDSWLLSVAFYYAARLNRNDRKRLFGMINELQTVFEVVSGARQQQSKERSSMDNGGR
AKPVKIENNGKVTDEAYEDDSDHGETLCGTCGGIYNADEFWIGCDMCERWYHGKCVKITPAKAESIKHYKCPSCSSKRAR
Q
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF12165 |
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| PF00628 |
|
| Alfin-like |
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| Hover here to show all domains | |
Nucleotide Sequence
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TAACGTTTCAGGGGTAAAAGCTCTC...
TAACGTTTCAGGGGTAAAAGCTCTCGAACAAAGAGGTGTACCGGCGCCACCGCCAGTACACACCAGCTCGCCGGAGATCACAAGAAGATACAAGACCGTGCTCCTCGACGCCGCCCGACATGGCGGACGCCGCCTCTGGCCGCGGCCACGTCGTCTACCCTCCCCGCTCCGCCGAGGACATCTTCAAGGACTACCGCGCCCGCCGGTCCGCCATCCTCCGCGCCCTCACTCACGAGGTCGAGGACTTCTACGCGCAGTGCGATCCAGACAAGGAGAACCTGTGCCTGTACGGCTACGCGAACGAGGCGTGGGAGGTGGCGCTGCCGGCAGAGGAGGTGCCCACGGAGCTGCCGGAGCCTGCGCTGGGAATCAACTTCGCGCGCGACGGAATGAACCGCCGGGACTGGCTTGCGCTCGTCGCCGTCCACTCCGACTCGTGGCTCCTCTCCGTCGCCTTTTACTATGCCGCTCGGCTTAATCGTAATGACCGGAAGCGCTTATTTGGTATGATTAATGAATTGCAAACTGTTTTTGAAGTTGTCTCCGGTGCGAGACAACAACAATCTAAAGAGAGGTCCAGTATGGACAATGGTGGTAGAGCCAAGCCTGTAAAGATAGAAAATAATGGAAAAGTCACAGACGAAGCATACGAAGATGACAGTGATCACGGTGAAACCCTATGTGGAACCTGTGGTGGGATATACAACGCGGATGAGTTTTGGATCGGGTGTGACATGTGCGAGCGATGGTACCATGGCAAGTGTGTCAAGATAACTCCTGCCAAGGCAGAGAGCATAAAGCATTACAAATGCCCGAGCTGCAGCTCCAAGAGGGCGAGGCAGTAGCAAAACCCATGAACGCAGGAAGCCTCCGAATGTGGGATGTATGGTGCAGAAGAGGCGCATTGCAAAGTTTGCAGGCAGGAGAAGGCCAAGAGGCCTCCATTTACAAGATTAGAACTATATTGCTATCTTCCCAGTGCCTTATGCTTGCGTTTACCTATGATAAGCTGATGTGAGGAAAGATAAGACATTTGGCAACCAGAGGCACTTAGTTAAATGCCCCTTGATATACATGGGGGTAAAAGAAGAGGAACTCATGTTTTGTCGAATATATGGAATCTTTTTTTCCCCTCTTACAGTAACATGTACTCCATCATACATAATTT
GRMZM5G893976_T01 from maize genome v3
Amino Acid Sequence
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MADAASGRGHVVYPPRSAEDIFKDYRARRSAILRALTHEVEDFYAQCDPDKENLCLYGYANEAWEVALPAEEVPTELPEP
ALGINFARDGMNRRDWLALVAVHSDSWLLSVAFYYAARLNRNDRKRLFGMINELQTVFEVVSGARQQQSKERSSMDNGGR
AKPVKIENNGKVTDEAYEDDSDHGETLCGTCGGIYNADEFWIGCDMCERWYHGKCVKITPAKAESIKHYKCPSCSSKRAR
Q
Nucleotide Sequence
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CCGGCGCCACCGCCAGTACACACCA...
CCGGCGCCACCGCCAGTACACACCAGCTCGCCGGAGATCACAAGAAGATACAAGACCGTGCTCCTCGACGCCGCCCGACATGGCGGACGCCGCCTCTGGCCGCGGCCACGTCGTCTACCCTCCCCGCTCCGCCGAGGACATCTTCAAGGACTACCGCGCCCGCCGGTCCGCCATCCTCCGCGCCCTCACTCACGAGGTCGAGGACTTCTACGCGCAGTGCGATCCAGACAAGGAGAACCTGTGCCTGTACGGCTACGCGAACGAGGCGTGGGAGGTGGCGCTGCCGGCAGAGGAGGTGCCCACGGAGCTGCCGGAGCCTGCGCTGGGAATCAACTTCGCGCGCGACGGAATGAACCGCCGGGACTGGCTTGCGCTCGTCGCCGTCCACTCCGACTCGTGGCTCCTCTCCGTCGCCTTTTACTATGCCGCTCGGCTTAATCGTAATGACCGGAAGCGCTTATTTGGTATGATTAATGAATTGCAAACTGTTTTTGAAGTTGTCTCCGGTGCGAGACAACAACAATCTAAAGAGAGGTCCAGTATGGACAATGGTGGTAGAGCCAAGCCTGTAAAGATAGAAAATAATGGAAAAGTCACAGACGAAGCATACGAAGATGACAGTGATCACGGTGAAACCCTATGTGGAACCTGTGGTGGGATATACAACGCGGATGAGTTTTGGATCGGGTGTGACATGTGCGAGCGATGGTACCATGGCAAGTGTGTCAAGATAACTCCTGCCAAGGCAGAGAGCATAAAGCATTACAAATGCCCGAGCTGCAGCTCCAAGAGGGCGAGGCAGTAGCAAAACCCATGAACGCAGGAAGCCTCCGAATGTGGGATGTATGGTGCAGAAGAGGCGCATTGCAAAGTTTGCAGGCAGGAGAAGGCCAAGAGGCCTCCATTTACAAGATTAGAACTATATTGCTATCTTCCCAGTGCCTTATGCTTGCGTTTACCTATGATAAGCTGATGTGAGGAAAGATAAGACATTTGGCAACCAGAGGCACTTAGTTAAATGCCCCTTGATATACATGGGGGTAAAAGAAGAGGAACTCATGTTTTGTCGAATATATGGAATCTTTTTTTCCCCTCTTACAGTAACATGTACTCCATCATACATAATTTA
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